Commits

History for

onDakFastaHeader

Commits on Apr 5, 2017

moving SIFTS unit test to parse local file, since file from remote location has changed (and seems to contain inconsistent data)
andreasprlic
committed
7f39af2

Commits on Mar 29, 2017

more precise comparison of parsing speed between mtf and pdb file formats
andreasprlic
committed
a216f92
Merge pull request #4 from andreasprlic/mmtf105
josemduarte
authored
2e3b35f
cleanup
andreasprlic
committed
80a4e0c
new unit test that compares a slightly larger structure.
andreasprlic
committed
87583d2
new version of test now only compares parsing in RAM
andreasprlic
committed
f39c4cb
Updating test after file was remediated
josemduarte
committed
d277194
adding a parsing performance unit test for mmtf, that compares with pdb format parsing.
andreasprlic
committed
504f3c8

Commits on Mar 22, 2017

TestBond is updated to match the updated data in structure file used for test
Yana Valasatava
committed
e38a0f5

Commits on Jan 12, 2017

The fix to the insertion code issue to is use the ResidueNumber object as the hash key instead of a string made from the residue number. Fixes bug where structures with insertion codes were likely…
Matt Larson
committed
387946f

Commits on Dec 22, 2016

Issue 330: fixes for PDB Parser,
Matt Larson
committed
121aa1d

Commits on Nov 23, 2016

Fixed bug: NPE for CrystalBuilder on 4hhb. Moved TestCrystalBuilder to integrationtest.
josemduarte
committed
220737a

Commits on Nov 22, 2016

Commits on Nov 21, 2016

Merge pull request #600 from sbliven/fix557
andreasprlic
authored
3b093b9

Commits on Nov 10, 2016

Allow partial residue ranges (#557)
sbliven
committed
485e2c5

Commits on Nov 7, 2016

Update to biojava 5.0 ligand and chain model
sbliven
committed
019fa96

Commits on Oct 3, 2016

Fix unit tests
sbliven
committed
2d57e54
Add model-specific iteration over Groups and Atoms
sbliven
committed
ffc4a53

Commits on Sep 19, 2016

TestSuperPosition now tests rmsd of non-centered points.
josemduarte
committed
1d43a42
Merge branch 'svdsuperimpIssue' into superpose
lafita
committed
cc79186
Fix bug in centroid calculation SuperPositionSVD #588
lafita
committed
1982130

Commits on Sep 18, 2016

Commits on Sep 15, 2016

Commits on Sep 14, 2016

Issue #582 and some more work towards #545
josemduarte
committed
6a7284a

Commits on Sep 12, 2016

Commits on Sep 10, 2016

fixing a bug with setting the file parsing type in AtomCache. (mmtf and mmcif flags were both always set to true)
andreasprlic
committed
577e108

Commits on Sep 9, 2016

Modifications from the SuperPosition changes w compile errors
lafita
committed
523920e