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Commits on Jan 23, 2013

• merged some changes from multiple_outs branch.

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• minor corrections. multiple start points for fitness testing

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• rencode 2 baseline with pole example

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• Added support for custom print function in ReNCoDeProb

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• added some attributes to ARNetwork

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Commits on Jan 7, 2013

• log message added when loading the crossover operator

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• Added a note only.

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Commits on Jan 3, 2013

• added pickled() specialization for the ReNCoDeAgent (compatible with Python2.6)

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• fixed the genomesize in random agent

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• added gene oriented uniform crossover

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• added gene oriented 2p-xover. corrections to the base reproduction code.

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Commits on Jan 2, 2013

• Added agent specializations for rencode: dm initialization and random initialization. symbregression accepts the agent class through command line.

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• Changed crossover operators to accept the full individuals (instead of the standalone genome)

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Commits on Dec 20, 2012

• Minor changes to the pole balancing

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Commits on Dec 19, 2012

• Fixed ARN reset function. copy.deepcopy must be used

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• generalization and integration of pickled best accross full lib.

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• Fixed small bug introduced during refactoring.

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• added work-around issue 1398

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Commits on Dec 18, 2012

• Fixed output index.

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Commits on Dec 17, 2012

• Fixed issue with old pickle protocol (towards compatibility with python 2.6)

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• changed multiplexer evaluation to test all outputs.

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• Fixed the reset with cc_state. (broken due to previous issue with pickled ccs)

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Commits on Dec 16, 2012

• Best is now pickled (entire individual). Added a rotate-every-write filehandler for logging the best individual.

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Commits on Dec 15, 2012

• ARN models uniformization (some refactoring). No overlapping genes. Binary output at cellcode simplified.

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Commits on Dec 13, 2012

• Adjustments to Miguel's model.

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Commits on Dec 12, 2012

• Added Miguel Nicolau's ARN extension. Test with pole balancing.

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Commits on Dec 11, 2012

• Removed one of the hidden layers in ARNCoDe.

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Commits on Dec 10, 2012

• New computational model added: layered ARNCoDe. In-package test with 3-bit multiplexer problem. Symbolic regression experiment included.

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• Moving transposon (minor corrections)

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• Correction to allow sample_rate = 1.0

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Commits on Dec 3, 2012

• Added the moving transposon operator.

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• minor corrections.

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• Added uniform xover

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Commits on Nov 28, 2012

• Extended ARN as by Nicolau (except for the inputs), with single pole example from PyNEAT (with corrections)

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Commits on Nov 23, 2012

• Minor corrections.

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