Commits

Branch selector

master

User selector

All users

Datepicker

All time

Commit history

Commits on Mar 2, 2016

• Merge pull request #418 from abradle/master

  Show description for f6dc33f
  josemduarte

  committed
  f6dc33fView commit details

  Copy full SHA for f6dc33f

  Browse repository at this point

• Added unit test

  abradle

  committed
  db70738View commit details

  Copy full SHA for db70738

  Browse repository at this point

• Updated to remove debug print

  abradle

  committed
  1095731View commit details

  Copy full SHA for 1095731

  Browse repository at this point

• Updates to the parser to use the atom record asymid to authid mapping and not the ones parsed fron the header

  Show description for 6c97557
  abradle

  committed
  6c97557View commit details

  Copy full SHA for 6c97557

  Browse repository at this point

Commits on Mar 1, 2016

• Adding some logging for #398 that mitigatest the issue

  josemduarte

  committed
  2f61673View commit details

  Copy full SHA for 2f61673

  Browse repository at this point

• Fixed bug: wasn't checking for server protocol properly

  josemduarte

  committed
  90078ccView commit details

  Copy full SHA for 90078cc

  Browse repository at this point

• this example was using the wrong Parameter class. fixed

  andreasprlic

  committed
  161c567View commit details

  Copy full SHA for 161c567

  Browse repository at this point

• Merge pull request #417 from abradle/thisbugfix

  Show description for b0f57a0
  andreasprlic

  committed
  b0f57a0View commit details

  Copy full SHA for b0f57a0

  Browse repository at this point

• Merge branch 'master' of https://github.com/biojava/biojava into thisbugfix

  abradle

  committed
  98d67deView commit details

  Copy full SHA for 98d67de

  Browse repository at this point

Commits on Feb 29, 2016

• Merge branch 'master' into thisbugfix

  abradle

  committed
  9a10e75View commit details

  Copy full SHA for 9a10e75

  Browse repository at this point

• Added unit test for the asym id parsing functionality

  abradle

  committed
  a780827View commit details

  Copy full SHA for a780827

  Browse repository at this point

• Updates to allow for parsing mmCif files and producing chains based on internal chain ids.

  abradle

  committed
  7691978View commit details

  Copy full SHA for 7691978

  Browse repository at this point

• Another fix: prefix can be too short

  josemduarte

  committed
  43095b3View commit details

  Copy full SHA for 43095b3

  Browse repository at this point

• Making sure that the file is renamed properly, better logging

  josemduarte

  committed
  3290fefView commit details

  Copy full SHA for 3290fef

  Browse repository at this point

• Merge pull request #416 from abradle/thisbugfix

  Show description for b2d9566
  andreasprlic

  committed
  b2d9566View commit details

  Copy full SHA for b2d9566

  Browse repository at this point

• Slight change - makes a temp file first and then copies across

  abradle

  committed
  bfcab5cView commit details

  Copy full SHA for bfcab5c

  Browse repository at this point

• Updated code to bug fix - so when download fails it doesn't make an empty file

  abradle

  committed
  5098306View commit details

  Copy full SHA for 5098306

  Browse repository at this point

• Added extra file parsing parameter and functionality to parse PDB file using internal rather than public facing chain ids

  abradle

  committed
  a322e02View commit details

  Copy full SHA for a322e02

  Browse repository at this point

Commits on Feb 24, 2016

• Merge remote-tracking branch 'upstream/master'

  josemduarte

  committed
  3f1f498View commit details

  Copy full SHA for 3f1f498

  Browse repository at this point

• Merge pull request #412 from abradle/master

  Show description for fc6e86d
  josemduarte

  committed
  fc6e86dView commit details

  Copy full SHA for fc6e86d

  Browse repository at this point

• Fixing issues arising after making DownloadChemCompProvider the default

  Show description for 7437124
  josemduarte

  committed
  7437124View commit details

  Copy full SHA for 7437124

  Browse repository at this point

Commits on Feb 23, 2016

• Added test for alternate location bonds

  abradle

  committed
  4f91cfbView commit details

  Copy full SHA for 4f91cfb

  Browse repository at this point

• Updated the bond maker to make alternate locationo bonds

  abradle

  committed
  b9f8dffView commit details

  Copy full SHA for b9f8dff

  Browse repository at this point

Commits on Feb 22, 2016

• Merge pull request #411 from emckee2006/master

  Show description for 7d3185f
  emckee2006

  committed
  7d3185fView commit details

  Copy full SHA for 7d3185f

  Browse repository at this point

• Merge pull request #41 from biojava/master

  Show description for 192c72a
  emckee2006

  committed
  192c72aView commit details

  Copy full SHA for 192c72a

  Browse repository at this point

Commits on Feb 20, 2016

• Merge branch 'master' of github.com:biojava/biojava

  Show description for 7e53ea7
  andreasprlic

  committed
  7e53ea7View commit details

  Copy full SHA for 7e53ea7

  Browse repository at this point

• new method for getting all ribosomes, some cleanup.

  andreasprlic

  committed
  373dd96View commit details

  Copy full SHA for 373dd96

  Browse repository at this point

• Merge pull request #409 from edlunde-dnastar/ter

  Show description for f80ac2a
  josemduarte

  committed
  f80ac2aView commit details

  Copy full SHA for f80ac2a

  Browse repository at this point

Commits on Feb 19, 2016

• Fix NPE in the mmCIF parser when provided zero-length files.

  

  Matt Larson

  committed
  4d5f5a8View commit details

  Copy full SHA for 4d5f5a8

  Browse repository at this point

• Adding TER records to pdb file export.

  

  Matt Larson

  committed
  d9c1481View commit details

  Copy full SHA for d9c1481

  Browse repository at this point

• Add method to allow pulling protein aliases from UniProt records

  emckee2006

  committed
  e68da52View commit details

  Copy full SHA for e68da52

  Browse repository at this point

Commits on Feb 16, 2016

• Change print optimization history format in SymmOptimizer

  lafita

  committed
  8a99d94View commit details

  Copy full SHA for 8a99d94

  Browse repository at this point

Commits on Feb 15, 2016

• Merge pull request #40 from biojava/master

  Show description for e3054d9
  emckee2006

  committed
  e3054d9View commit details

  Copy full SHA for e3054d9

  Browse repository at this point

• Create method to update symmetry scores

  Show description for 640b2ac
  lafita

  committed
  640b2acView commit details

  Copy full SHA for 640b2ac

  Browse repository at this point

Commits on Feb 11, 2016

• Merge pull request #406 from andreasprlic/master

  Show description for d76c8ed
  josemduarte

  committed
  d76c8edView commit details

  Copy full SHA for d76c8ed

  Browse repository at this point