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Commits on Sep 3, 2016

• Merge pull request #571 from lafita/quatalign

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Commits on Sep 1, 2016

• Merge pull request #570 from sbliven/jmol-mmtf

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• Move long tests to the intergationtest package

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Commits on Aug 31, 2016

• Fix Calc centroid and center of mass documentation

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Commits on Aug 30, 2016

• Switch Jmol interaction to use MMTF

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• Small fix TestQsAlign

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• Small change to SuperpositionQCP test

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• Merge branch 'master' into quatalign

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Commits on Aug 29, 2016

• Merge branch 'bugfixes-4.2'

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• Update Jmol to 14.6.2_2016.08.28

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• Switching Jmol interchange format to MMCIF

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• Update to Jmol 14.6.1

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• Merge pull request #569 from sbliven/jmol14

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• Update Jmol to 14.6.2_2016.08.28

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Commits on Aug 28, 2016

• Merge pull request #567 from andviane/master

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Commits on Aug 26, 2016

• Switching Jmol interchange format to MMCIF

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• Update to Jmol 14.6.1

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Commits on Aug 25, 2016

• More tests for issue #355

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• Pulling in the @josemduarte test case for issue #355

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• Merge pull request #568 from emckee2006/master

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• Merge branch 'pr/44'

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• add ability to pull gene and protein aliases from uniprot

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Commits on Aug 24, 2016

• Cleanup

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• Fix 355

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Commits on Aug 23, 2016

• Merge pull request #555 from andreasprlic/master

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• Merge pull request #43 from biojava/master

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Commits on Aug 22, 2016

• Merge pull request #566 from andviane/master

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Commits on Aug 21, 2016

• TestMMcifOrganismParsing: Using enum rather than String for comparison.

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• CoxInfo.fmt: Do not compare NaNs with == (use Double.isNaN)

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• SymmetryTools.getResetVal: Do not compare NaNs with ==, use

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• GenericInsdcHeaderFormat: Fixed formatting codes.

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Commits on Aug 19, 2016

• Addressing @josemduarte 's comment to change log level for method.

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• Merge branch 'master' of github.com:biojava/biojava

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• Updating to latest version in readme

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Commits on Aug 18, 2016

• disabling cobertura again, until we can successfully exclude MMCifFileTools

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